LASSO Method for Additive Risk Models with High Dimensional Covariates

نویسندگان

  • Shuangge Ma
  • Jian Huang
چکیده

1 Summary. The additive risk model is a useful alternative to the proportional hazards model. It postulates that the hazard function is the sum of the baseline hazard function and the regression function of covariates. In this article, we investigate estimation in the additive risk model with right censored survival data and high dimensional covariates. A LASSO (least absolute shrinkage and selection operator) approach is proposed for estimating the regression parameters. We propose using the L 1 boosting algorithm, which is computationally affordable and relatively easy to implement, to compute the LASSO estimates. The V-fold cross validation is applied to select the tuning parameter and the weighted bootstrap is used to estimate the variances of the LASSO estimators. The proposed approach is illustrated with analysis of the PBC clinical data and the DLBCL genomic data. It is shown that this approach can provide interpretable and sparse predictive models with satisfactory predication and classification properties.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Oracle Inequalities and Selection Consistency for Weighted Lasso in High-dimensional Additive Hazards Model

The additive hazards model has many applications in high-throughput genomic data analysis and clinical studies. In this article, we study the weighted Lasso estimator for the additive hazards model in sparse, high-dimensional settings where the number of time-dependent covariates is much larger than the sample size. Based on compatibility, cone invertibility factors, and restricted eigenvalues ...

متن کامل

Sparse Additive Models

We present a new class of methods for high-dimensional nonparametric regression and classification called sparse additive models (SpAM). Our methods combine ideas from sparse linear modeling and additive nonparametric regression. We derive an algorithm for fitting the models that is practical and effective even when the number of covariates is larger than the sample size. SpAM is essentially a ...

متن کامل

High Dimensional Structured Estimation with Noisy Designs

Structured estimation methods, such as LASSO, have received considerable attention in recent years and substantial progress has been made in extending such methods to general norms and non-Gaussian design matrices. In real world problems, however, covariates are usually corrupted with noise and there have been efforts to generalize structured estimation method for noisy covariate setting. In th...

متن کامل

Path consistent model selection in additive risk model via Lasso.

As a flexible alternative to the Cox model, the additive risk model assumes that the hazard function is the sum of the baseline hazard and a regression function of covariates. For right censored survival data when variable selection is needed along with model estimation, we propose a path consistent model selector using a modified Lasso approach, under the additive risk model assumption. We sho...

متن کامل

Adaptive Lasso for Sparse High-dimensional Regression Models

We study the asymptotic properties of the adaptive Lasso estimators in sparse, high-dimensional, linear regression models when the number of covariates may increase with the sample size. We consider variable selection using the adaptive Lasso, where the L1 norms in the penalty are re-weighted by data-dependent weights. We show that, if a reasonable initial estimator is available, under appropri...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2005